[ Source: pairtools ]
Package: python3-pairtools (1.1.3-2 and others)
Links for python3-pairtools
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Download Source Package pairtools:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
Framework to process sequencing data from a Hi-C experiment
Simple and fast command-line framework to process sequencing data from a Hi-C experiment.
Process pair-end sequence alignments and perform the following operations:
- Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
sequences of Hi-C DNA molecules
- Sort .pairs files for downstream analyses
- Detect, tag and remove PCR/optical duplicates
- Generate extensive statistics of Hi-C datasets
- Select Hi-C pairs given flexibly defined criteria
- Restore .sam alignments from Hi-C pairs
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Download python3-pairtools
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 1.1.3-2+b1 | 248.5 kB | 1,243.0 kB | [list of files] |
| arm64 | 1.1.3-2+b1 | 224.2 kB | 1,457.0 kB | [list of files] |
| ppc64el | 1.1.3-2+b1 | 237.3 kB | 1,585.0 kB | [list of files] |
| riscv64 | 1.1.3-2+b1 | 245.8 kB | 1,049.0 kB | [list of files] |