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1. BRAID BRAID Public

   BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

   219 10

2. scimilarity scimilarity Public

   A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

   Python 233 21

3. gReLU gReLU Public

   gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

   Python 314 50

4. SpatialAgent SpatialAgent Public

   Autonomous AI agent for spatial transcriptomics, single-cell RNA-seq, and molecular biology

   Python 139 15

5. equifold equifold Public

   Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

   Python 127 19

6. gneprop gneprop Public

   GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

   Jupyter Notebook 39 5